| Protein ZmGRF2 | |
|---|---|
|
ZmGRF2 is a protein in the GRF family.
|
|
| Information | |
| TF Name: | ZmGRF2 |
| Species: | Maize |
| TF Family: | GRF |
| Gene Name(Synonym): | AY109917 |
| Uniprot ID: | B4FN96 |
| Subgenome: | 2 |
Protein ZmGRF2
ZmGRF2 is a protein in the GRF family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF08879 | PF08880 | |
| Zm00001eb104790_T001 |  | |
| Zm00001eb104790_T002 | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d006348 | DAPseq |  |
sequence | fimo | position |
| Zm00001d006348 | DAPseq |  |
sequence | fimo | position |
| Zm00001d006348 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d006348 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmGRF2 is the regulator
Interactions where ZmGRF2 is the target
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Zm00001eb104790_T001 from maize genome v5
Amino Acid Sequence
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MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF08880 |
|
| PF08879 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GCCCCTGCCAAGCAAACCTTTTTTC...
GCCCCTGCCAAGCAAACCTTTTTTCCCCTCTGCACGCTACTCTCTCCTTTCTCACTACCCCGCCCGTCAAAGCGAGAGCGCCGTATCACCGGTCTATCCATCCCTTCACCGCTGCCTCGACCCGCGCCGAAAGATACCTTTCCCCCCCTTCCTCTCGCGCCGCCGTTTTGGTGCGACCATGGCGGCGGAGGGGGAGGCCAAGAACCCGTCCGGCGGTGGCGAAGGGGGTAACCCCCAGCACCAGCAGGCAGTGCAGGCTGCGCCGGCGGAGCCGCCAACGGCACAGGGGGAAGCGGTGCAGGAGGCTGGAGCGCAGGCGACGGGACAAGAGCCGGAGGGGGAGAAGGCGAATCGAGATGGGGAGGGAAGCGCGGGGGAGAAGGACGACGGCGCGTGCAGAGATCTGGTTCTGGTTGAGGATCCGGAGGTGCTCGCCGTCGAGGACCCGGAGGAAGCTGCAGCAACCGCAGCACTCCAGGAAGAAATGAAAGCGCTCGTGGCATCCGTCCCTGACGGTGCTGGGGCAGCATTCACAGCCATGCAGCTTCAGGAGCTAGAGCAGCAGTCCCGGGTTTATCAGTACATGGCTGCCCGAGTACCTGTGCCTACTCACCTCGTCTTCCCCGTATGGAAGAGTGTAACCGGTGCATCCTCTGAAGGCGCCCAGAAGTACCCTACTTTGTTGGGCTTAGCAACACTCTGCTTGGACTTCGGGAAGAACCCTGAACCAGAACCAGGGAGGTGCCGGCGAACGGATGGCAAAAAATGGCGATGTTGGAGAAACACTATTCCAAACGAGAAGTACTGCGAACGCCACATGCATCGCGGTCGCAAGCGTCCTGTACAGGTCGTTGAGGAAGCCGAGCCTGACTCTGCTTCAGGCTCAAAATCTGCTCCCAGCAAGGCCACCGAAGGCGCCAAGAAGGTTGACGACAAGAGCCCAGGTAGCAAGAAGCTTGCCGTGGCGGCGGCAGCTGCAGCTGCTGTGCAGTCTACGTAATTGATGCAGCATTTTAGTAGTCGCAGGAAGAGCATGGCGGCGCTGGCAACTAGCGCCTTCTTTTCATTGCATGTGATCTTTAGCTATAACCTCATTTAGCACACTCCCAGTGGTGTCCGTGGGAGGAGGAAGCCGCAAGAACTTCCCCCGTAGGGTGTCGACTGAAAAAATTCACTTGTAGCTGTATAGTTTGATCTCTAGCTTTGTCGTGCCTCCGGCCTTCAGGTAGGCGATGCGGCATGATGTTATAAATCCTCTCCCAGAACTGACAATATCGCATTGTAACCCAAGAAGCCGGTGCAAGAACCTGTGAAACTGCATTGATGCGCAATTATGTGATTCATCAGTTGTATAACAAAGTGGAAGATGCATAATTTTATGCCTCGTGGAGGCTGTGACTATGTTATTCTGATAGTAATGAGTACGCCAGAGATTGGATGTCGAG
GRMZM2G004619_T01 from maize genome v3
Amino Acid Sequence
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MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
Nucleotide Sequence
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AAACCTTTTTTCCCCTCTGCACGCT...
AAACCTTTTTTCCCCTCTGCACGCTACTCTCTCCTTTCTCACTACCCCGCCCGTCAAAGCGAGAGCGCCGTATCACCGGTCTATCCATCCCTTCACCGCTGCCTCGACCCGCGCCGAAAGATACCTTTCCCCCCCTTCCTCTCGCGCCGCCGTTTTGGTGCGACCATGGCGGCGGAGGGGGAGGCCAAGAACCCGTCCGGCGGTGGCGAAGGGGGTAACCCCCAGCACCAGCAGGCAGTGCAGGCTGCGCCGGCGGAGCCGCCAACGGCACAGGGGGAAGCGGTGCAGGAGGCTGGAGCGCAGGCGACGGGACAAGAGCCGGAGGGGGAGAAGGCGAATCGAGATGGGGAGGGAAGCGCGGGGGAGAAGGACGACGGCGCGTGCAGAGATCTGGTTCTGGTTGAGGATCCGGAGGTGCTCGCCGTCGAGGACCCGGAGGAAGCTGCAGCAACCGCAGCACTCCAGGAAGAAATGAAAGCGCTCGTGGCATCCGTCCCTGACGGTGCTGGGGCAGCATTCACAGCCATGCAGCTTCAGGAGCTAGAGCAGCAGTCCCGGGTTTATCAGTACATGGCTGCCCGAGTACCTGTGCCTACTCACCTCGTCTTCCCCGTATGGAAGAGTGTAACCGGTGCATCCTCTGAAGGCGCCCAGAAGTACCCTACTTTGTTGGGCTTAGCAACACTCTGCTTGGACTTCGGGAAGAACCCTGAACCAGAACCAGGGAGGTGCCGGCGAACGGATGGCAAAAAATGGCGATGTTGGAGAAACACTATTCCAAACGAGAAGTACTGCGAACGCCACATGCATCGCGGTCGCAAGCGTCCTGTACAGGTCGTTGAGGAAGCCGAGCCTGACTCTGCTTCAGGCTCAAAATCTGCTCCCAGCAAGGCCACCGAAGGCGCCAAGAAGGTTGACGACAAGAGCCCAGGTAGCAAGAAGCTTGCCGTGGCGGCGGCAGCTGCAGCTGCTGTGCAGTCTACGTAATTGATGCAGCATTTTAGTAGTCGCAGGAAGAGCATGGCGGCGCTGGCAACTAGCGCCTTCTTTTCATTGCATGTGATCTTTAGCTATAACCTCATTTAGCACACTCCCAGTGGTGTCCGTGGGAGGAGGAAGCCGCAAGAACTTCCCCCGTAGGGTGTCGACTGAAAAAATTCACTTGTAGCTGTATAGTTTGATCTCTAGCTTTGTCGTGCCTCCGGCCTTCAGGTAGGCGATGCGGCATGATGTTATAAATCCTCTCCCAGAACTGACAATATCGCATTGTAACCCAAGAAGCCGGTGCAAGAACCTGTGAAACTGCATTGATGCGCAATTATGTGATTCATCAGTTGTATAACAAAGTGGAAGATGCATAATTTTATGCCTCGTGGAGGCTGTGACTATGTTATTCTGATAGTAATGAGTACGCCAGAGATTGGATGTCGAG
GRMZM2G004619_T02 from maize genome v3
Amino Acid Sequence
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MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEGTTPVLAVSLSLRPWL
Nucleotide Sequence
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AAACCTTTTTTCCCCTCTGCACGCT...
AAACCTTTTTTCCCCTCTGCACGCTACTCTCTCCTTTCTCACTACCCCGCCCGTCAAAGCGAGAGCGCCGTATCACCGGTCTATCCATCCCTTCACCGCTGCCTCGACCCGCGCCGAAAGATACCTTTCCCCCCCTTCCTCTCGCGCCGCCGTTTTGGTGCGACCATGGCGGCGGAGGGGGAGGCCAAGAACCCGTCCGGCGGTGGCGAAGGGGGTAACCCCCAGCACCAGCAGGCAGTGCAGGCTGCGCCGGCGGAGCCGCCAACGGCACAGGGGGAAGCGGTGCAGGAGGCTGGAGCGCAGGCGACGGGACAAGAGCCGGAGGGGGAGAAGGCGAATCGAGATGGGGAGGGAAGCGCGGGGGAGAAGGACGACGGCGCGTGCAGAGATCTGGTTCTGGTTGAGGATCCGGAGGTGCTCGCCGTCGAGGACCCGGAGGAAGGTACAACGCCCGTTCTTGCAGTCTCTCTCTCTCTCCGGCCTTGGCTCTAGTAGTAGTTGCCCCTGTTGGTGCTTGTGTCTCAGCTGTCAGATGCATGGATACACTGACGTTTTTTTTCCTTCTGAACATAACAGGTGCTCATAAACAGAAAAAAAATAAAGAAAA
Zm00001d006348_T001 from maize genome v4
Amino Acid Sequence
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MAAEGEAKNPSGGGEGGNPQHQQAVQAAPAEPPTAQGEAVQEAGAQATGQEPEGEKANRDGEGSAGEKDDGACRDLVLVE
DPEVLAVEDPEEAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPVWKSVTGASSE
GAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEPDSASGSKSAP
SKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
Nucleotide Sequence
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AAACCTTTTTTCCCCTCTGCACGCT...
AAACCTTTTTTCCCCTCTGCACGCTACTCTCTCCTTTCTCACTACCCCGCCCGTCAAAGCGAGAGCGCCGTATCACCGGTCTATCCATCCCTTCACCGCTGCCTCGACCCGCGCCGAAAGATACCTTTCCCCCCCTTCCTCTCGCGCCGCCGTTTTGGTGCGACCATGGCGGCGGAGGGGGAGGCCAAGAACCCGTCCGGCGGTGGCGAAGGGGGTAACCCCCAGCACCAGCAGGCAGTGCAGGCTGCGCCGGCGGAGCCGCCAACGGCACAGGGGGAAGCGGTGCAGGAGGCTGGAGCGCAGGCGACGGGACAAGAGCCGGAGGGGGAGAAGGCGAATCGAGATGGGGAGGGAAGCGCGGGGGAGAAGGACGACGGCGCGTGCAGAGATCTGGTTCTGGTTGAGGATCCGGAGGTGCTCGCCGTCGAGGACCCGGAGGAAGCTGCAGCAACCGCAGCACTCCAGGAAGAAATGAAAGCGCTCGTGGCATCCGTCCCTGACGGTGCTGGGGCAGCATTCACAGCCATGCAGCTTCAGGAGCTAGAGCAGCAGTCCCGGGTTTATCAGTACATGGCTGCCCGAGTACCTGTGCCTACTCACCTCGTCTTCCCCGTATGGAAGAGTGTAACCGGTGCATCCTCTGAAGGCGCCCAGAAGTACCCTACTTTGTTGGGCTTAGCAACACTCTGCTTGGACTTCGGGAAGAACCCTGAACCAGAACCAGGGAGGTGCCGGCGAACGGATGGCAAAAAATGGCGATGTTGGAGAAACACTATTCCAAACGAGAAGTACTGCGAACGCCACATGCATCGCGGTCGCAAGCGTCCTGTACAGGTCGTTGAGGAAGCCGAGCCTGACTCTGCTTCAGGCTCAAAATCTGCTCCCAGCAAGGCCACCGAAGGCGCCAAGAAGGTTGACGACAAGAGCCCAGGTAGCAAGAAGCTTGCCGTGGCGGCGGCAGCTGCAGCTGCTGTGCAGTCTACGTAATTGATGCAGCATTTTAGTAGTCGCAGGAAGAGCATGGCGGCGCTGGCAACTAGCGCCTTCTTTTCATTGCATGTGATCTTTAGCTATAACCTCATTTAGCACACTCCCAGTGGTGTCCGTGGGAGGAGGAAGCCGCAAGAACTTCCCCCGTAGGGTGTCGACTGAAAAAATTCACTTGTAGCTGTATAGTTTGATCTCTAGCTTTGTCGTGCCTCCGGCCTTCAGGTAGGCGATGCGGCATGATGTTATAAATCCTCTCCCAGAACTGACAATATCGCATTGTAACCCAAGAAGCCGGTGCAAGAACCTGTGAAACTGCATTGATGCGCAATTATGTGATTCATCAGTTGTATAACAAAGTGGAAGATGCATAATTTTATGCCTCGTGGAGGCTGTGACTATGTTATTCTGATAGTAATGAGTACGCCAGAGATTGGATGTCGAG
Zm00001eb104790_T002 from maize genome v5
Amino Acid Sequence
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MFIWPEVLGWAPLRFFFSPLVTAAATAALQEEMKALVASVPDGAGAAFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPV
WKSVTGASSEGAQKYPTLLGLATLCLDFGKNPEPEPGRCRRTDGKKWRCWRNTIPNEKYCERHMHRGRKRPVQVVEEAEP
DSASGSKSAPSKATEGAKKVDDKSPGSKKLAVAAAAAAAVQST
Nucleotide Sequence
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CACCGGTCTATCCATCCCTTCACCG...
CACCGGTCTATCCATCCCTTCACCGCTGCCTCGACCCGCGCCGAAAGATACCTTTCCCCCCCTTCCTCTCGCGCCGCCGTTTTGGTGCGACCATGGCGGCGGAGGGGGAGGCCAAGAACCCGTCCGGCGGTGGCGAAGGGGGTAACCCCCAGCACCAGCAGGCAGTGCAGGCTGCGCCGGCGGAGCCGCCAACGGCACAGGGGGAAGCGGTGCAGGAGGCTGGAGCGCAGGCGACGGGACAAGAGCCGGAGGGGGAGAAGGCGAATCGAGATGGGGAGGGAAGCGCGGGGGAGAAGGACGACGGCGCGTGCAGAGATCTGGTTCTGGTTGAGGATCCGGAGGTGCTCGCCGTCGAGGACCCGGAGGAAGGTGCTCATAAACAGAAAAAAAATAAAGAAAATAACTTTGCGGGCAGATGGGGAGTTTATTTTTTTGTTTCCTGCTTCGGGTTCTATTAATAACTTTGTACTCTTGCTGAGAATACATATACATGCAAAGGATCAGAGATTGGGTCCAGTTATTCCTTTTGTACTAATCTGTTAGCTCTTATAGTTACTCAAAGGGTTGAAGGCTTCAGAAAAGCATGGTTTGTTTTATTCTATAAGTCCATTATTACGATCATTTGACTTGTACTCGTGCAATAAACAGAAGGCCCTTTCTTCCTTTCACCTCTTTGTTGTTATGCTACTTTTCCCTGATACAGTGAACACGAAATTGAATCTTATTTGAAGTTATATGTGTGCAATCCTTTTTGTTCTGCCTTATTTTTTGTGCTGTCTGCGTTGAACTAAGTACTCATGCATGCATGTATGAATTGAGGATTTATGTTTATTTGGCCTGAAGTTCTTGGCTGGGCGCCTCTGAGATTTTTTTTCTCTCCCCTGGTTACAGCTGCAGCAACCGCAGCACTCCAGGAAGAAATGAAAGCGCTCGTGGCATCCGTCCCTGACGGTGCTGGGGCAGCATTCACAGCCATGCAGCTTCAGGAGCTAGAGCAGCAGTCCCGGGTTTATCAGTACATGGCTGCCCGAGTACCTGTGCCTACTCACCTCGTCTTCCCCGTATGGAAGAGTGTAACCGGTGCATCCTCTGAAGGCGCCCAGAAGTACCCTACTTTGTTGGGCTTAGCAACACTCTGCTTGGACTTCGGGAAGAACCCTGAACCAGAACCAGGGAGGTGCCGGCGAACGGATGGCAAAAAATGGCGATGTTGGAGAAACACTATTCCAAACGAGAAGTACTGCGAACGCCACATGCATCGCGGTCGCAAGCGTCCTGTACAGGTCGTTGAGGAAGCCGAGCCTGACTCTGCTTCAGGCTCAAAATCTGCTCCCAGCAAGGCCACCGAAGGCGCCAAGAAGGTTGACGACAAGAGCCCAGGTAGCAAGAAGCTTGCCGTGGCGGCGGCAGCTGCAGCTGCTGTGCAGTCTACGTAATTGATGCAGCATTTTAGTAGTCGCAGGAAGAGCATGGCGGCGCTGGCAACTAGCGCCTTCTTTTCATTGCATGTGATCTTTAGCTATAACCTCATTTAGCACACTCCCAGTGGTGTCCGTGGGAGGAGGAAGCCGCAAGAACTTCCCCCGTAGGGTGTCGACTGAAAAAATTCACTTGTAGCTGTATAGTTTGATCTCTAGCTTTGTCGTGCCTCCGGCCTTCAGGTAGGCGATGCGGCATGATGTTATAAATCCTCTCCCAGAACTGACAATATCGCATTGTAACCCAAGAAGCCGGTGCAAGAACCTGTGAAACTGCATTGATGCGCAATTATGTGATTCATCAGTTGTATAACAAAGTGGAAGATGCATAATTTTATGCCTCGTGGAGGCTGTGACTATGTTATTCTGATAGTAATGAGTACGCCAGAGATTGGATGTCGAG
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